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Class: MappingSetReference

A reference to a mapping set. It allows to augment mapping set metadata from the perspective of the registry, for example, providing confidence, or a local filename or a grouping.

URI: sssom:MappingSetReference

classDiagram class MappingSetReference MappingSetReference : last_updated MappingSetReference : local_name MappingSetReference : mapping_set_group MappingSetReference : mapping_set_id MappingSetReference : mirror_from MappingSetReference : registry_confidence

Slots

Name Cardinality and Range Description Inheritance
mapping_set_id 1
NonRelativeURI
A globally unique identifier for the mapping set (not each individual mapping... direct
mirror_from 0..1
NonRelativeURI
A URL location from which to obtain a resource, such as a mapping set direct
registry_confidence 0..1
Double
This value is set by the creator/maintainer of the mapping registry and refle... direct
mapping_set_group 0..1
String
Set by the owners of the mapping registry direct
last_updated 0..1
Date
The date this reference was last updated direct
local_name 0..1
String
The local name assigned to file that corresponds to the downloaded mapping se... direct

Usages

used by used in type used
MappingRegistry mapping_set_references range MappingSetReference

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/sssom/schema/

Mappings

Mapping Type Mapped Value
self sssom:MappingSetReference
native sssom:MappingSetReference

LinkML Source

Direct

name: mapping set reference
description: A reference to a mapping set. It allows to augment mapping set metadata
  from the perspective of the registry, for example, providing confidence, or a local
  filename or a grouping.
from_schema: https://w3id.org/sssom/schema/
rank: 1000
slots:
- mapping_set_id
- mirror_from
- registry_confidence
- mapping_set_group
- last_updated
- local_name

Induced

name: mapping set reference
description: A reference to a mapping set. It allows to augment mapping set metadata
  from the perspective of the registry, for example, providing confidence, or a local
  filename or a grouping.
from_schema: https://w3id.org/sssom/schema/
rank: 1000
attributes:
  mapping_set_id:
    name: mapping_set_id
    description: A globally unique identifier for the mapping set (not each individual
      mapping). Should ideally be resolvable.
    examples:
    - value: http://purl.obolibrary.org/obo/mondo/mappings/mondo_exactmatch_ncit.sssom.tsv
      description: A persistent URI pointing to the latest version of the Mondo -
        NCIT mapping in the Mondo namespace.
    from_schema: https://w3id.org/sssom/schema/
    rank: 1000
    alias: mapping_set_id
    owner: mapping set reference
    domain_of:
    - mapping set
    - mapping set reference
    range: NonRelativeURI
    required: true
  mirror_from:
    name: mirror_from
    description: A URL location from which to obtain a resource, such as a mapping
      set.
    from_schema: https://w3id.org/sssom/schema/
    rank: 1000
    alias: mirror_from
    owner: mapping set reference
    domain_of:
    - mapping set reference
    range: NonRelativeURI
  registry_confidence:
    name: registry_confidence
    description: 'This value is set by the creator/maintainer of the mapping registry
      and reflects the confidence the mapping registry has in the correctness (i.e.,
      precision) of mappings in the mapping set.

      When not explicitly specified, confidence estimation algorithms should consider
      the registry confidence in a mapping set to be 1.0 by default.'
    examples:
    - value: '0.95'
      description: A confidence score of 0.95, indicating 95% confidence.
    from_schema: https://w3id.org/sssom/schema/
    see_also:
    - https://mapping-commons.github.io/sssom/confidence-model
    rank: 1000
    alias: registry_confidence
    owner: mapping set reference
    domain_of:
    - mapping set reference
    range: double
    minimum_value: 0.0
    maximum_value: 1.0
  mapping_set_group:
    name: mapping_set_group
    description: Set by the owners of the mapping registry. A way to group related
      mapping sets for example for UI purposes.
    from_schema: https://w3id.org/sssom/schema/
    rank: 1000
    alias: mapping_set_group
    owner: mapping set reference
    domain_of:
    - mapping set reference
    range: string
  last_updated:
    name: last_updated
    description: The date this reference was last updated.
    from_schema: https://w3id.org/sssom/schema/
    rank: 1000
    alias: last_updated
    owner: mapping set reference
    domain_of:
    - mapping set reference
    range: date
  local_name:
    name: local_name
    description: The local name assigned to file that corresponds to the downloaded
      mapping set.
    from_schema: https://w3id.org/sssom/schema/
    rank: 1000
    alias: local_name
    owner: mapping set reference
    domain_of:
    - mapping set reference
    range: string